{% extends "analyseMicroarrayData/base_detail_experiment.html" %} {%block hoverExperiments%}class='hover'{%endblock%} {% block rightTitle %}

Classify new samples

{%endblock%} {% block experimentalResults%} {%if predictedClasses%}

Options

{%else%}

Specification of Options

{%endif%} {%if predictedClasses%} {%else%} {%endif%}

New Sample file

URL of the sample file {%if predictedClasses%}
{{values.newSamplesURL}} {%else%} {{form.newSamplesURL}} {%endif%} {% if form.newSamplesURL.errors %}
*** {{ form.newSamplesURL.errors|join:", " }}
{% endif %}
Is there a header providing the names of the samples in this files ? {% for i in form.sampleNames.field_list %} {{ i.field }} {{i.name}} {% endfor %} {% if form.sampleNames.errors %}
*** {{ form.sampleNames.errors|join:", " }}
{% endif %}
Does the first column (or row) provide the names of the genes ? {% for i in form.featureNames.field_list %} {{ i.field }} {{i.name}} {% endfor %} {% if form.featureNames.errors %}
*** {{ form.featureNames.errors|join:", " }}
{% endif %}

Normalize the gene expressions ? {% for i in form.normalize.field_list %} {{ i.field }} {{i.name}} {% endfor %} {% if form.normalize.errors %}

*** {{ form.normalize.errors|join:", " }}
{% endif %}

{% for i in form.normalizeWhat.field_list %} {{ i.field }} {{i.name}} {% endfor %} {% if form.normalizeWhat.errors %}

*** {{ form.normalizeWhat.errors|join:", " }}
{% endif %}

Does a column correspond to a sample and a row to the expression levels for a given gene ?

{% for i in form.dontTranspose.field_list %} {{ i.field }} {{i.name}} {% endfor %} {% if form.dontTranspose.errors %}
*** {{ form.dontTranspose.errors|join:", " }}
{% endif %}
{%if isNSC%}

Threshold

Which threshold would you like to consider ? {%else%}

Size of subset

Which size of gene subset would you like to consider ? {%endif%} {%if predictedClasses%} {%if isNSC%} {{values.optionValue}} {%else%} {{values.optionValue}} {%endif%} {%else%} {%if optionValues%} {%endif%} {%endif%}
{%if predictedClasses%} Modify these options {%else%} {%endif%}
{%if predictedClasses%}

Class predictions

{%for sample in predictedClasses%} {%endfor%}
Sample name Class predicted
{{sample.name}} {{sample.class}}
{%endif%} {%endblock%}